Personal profile
Research Interests
Research in our laboratory focuses on the spirochete Borrelia (Borreliella) burgdorferi, the etiologic agent of Lyme disease. The enzootic life cycle of B. burgdorferi involves a tick vector and a vertebrate host: different sets of genes are expressed in these diverse environments. We are primarily interested in the molecular mechanisms by which the spirochete senses that the tick vector is feeding on a vertebrate host and subsequently regulates its gene expression to effect transmission. We also study the cellular mechanisms required for persistence of B. burgdorferi in the tick vector.
We dissect the roles of alternative sigma factors, the stringent response and transcription factors as well as small RNAs, RNA chaperones and ribonucleases in the regulation of gene expression and in response to changes in nutrient availability. Another major focus is the biology of the ϕBB-1 bacteriophage, which we hypothesize generates the diverse genetic repertoire required for long-term survival of the Lyme disease spirochete population in its host reservoir. In addition, we are interested in the molecular physiology of B. burgdorferi because of its unusual bacterial genome. Furthermore, we have been involved in developing molecular genetic tools to address these research questions, including a system to artificially regulate transcription in the spirochete in an enzootic cycle model.
Teaching Experience
BIOB 260 Cellular and Molecular Biology
BIOB 160N Principles of Living Systems
BCH 380 Biochemistry
Education/Academic qualification
Bachelor, Colorado College
Doctorate, University of Arizona
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
-
SDG 3 Good Health and Well-being
Fingerprint
- 1 Similar Profiles
Collaborations and top research areas from the last five years
-
Dissection of amino acid acquisition pathways demonstrates that amino acid starvation of Borrelia burgdorferi results in a (p)ppGpp-independent maladaptive response
Kataria, A., Bohrnsen, E., Schwarz, B., Drecktrah, D., Samuels, D. S., Carmody, A. B., Myers, L. M. & Groshong, A. M., Jan 23 2026, In: Communications Biology. 9, 105.Research output: Contribution to journal › Article › peer-review
Open Access -
The BosR Is Back!
Samuels, D. S. & Lybecker, M. C., Feb 2026, In: Molecular Microbiology. 125, 2, p. 81-84 4 p.Research output: Contribution to journal › Comment/debate
Open Access -
Characterization and genomic analysis of the Lyme disease spirochete bacteriophage ϕBB-1
Faith, D. R., Kinnersley, M., Brooks, D. M., Drecktrah, D., Hall, L. S., Luo, E., Santiago-Frangos, A., Wachter, J., Samuels, D. S. & Secor, P. R., Apr 2024, In: PLoS Pathogens. 20, 4, p. e1012122 e1012122.Research output: Contribution to journal › Article › peer-review
Open Access13 Scopus citations -
Antigen-Specific CD4 T Cell and B Cell Responses to Borrelia burgdorferi
Hammond, E. M., Olsen, K. J., Ram, S., Tran, G. V. V., Hall, L. S., Bradley, J. E., Lund, F. E., Samuels, D. S. & Baumgarth, N., Sep 15 2023, In: Journal of Immunology. 211, 6, p. 994-1005 12 p.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
c-di-GMP regulates activity of the PlzA RNA chaperone from the Lyme disease spirochete
Van Gundy, T., Patel, D., Bowler, B. E., Rothfuss, M. T., Hall, A. J., Davies, C., Hall, L. S., Drecktrah, D., Marconi, R. T., Samuels, D. S. & Lybecker, M. C., Jun 2023, In: Molecular Microbiology. 119, 6, p. 711-727 17 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations