Extensive Phylogenetic Analysis of a Soil Bacterial Community Illustrates Extreme Taxon Evenness and the Effects of Amplicon Length, Degree of Coverage, and DNA Fractionation on Classification and Ecological Parameters

Sergio E. Morales; Theodore F. Cosart; Jesse V. Johnson; William E. Holben

doi:10.1002/9781118010549.ch16

Extensive Phylogenetic Analysis of a Soil Bacterial Community Illustrates Extreme Taxon Evenness and the Effects of Amplicon Length, Degree of Coverage, and DNA Fractionation on Classification and Ecological Parameters

Sergio E. Morales
, Theodore F. Cosart
, Jesse V. Johnson
, William E. Holben

Computer Science

University of Montana

Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

Original language	English
Title of host publication	Handbook of Molecular Microbial Ecology II
Subtitle of host publication	Metagenomics in Different Habitats
Publisher	John Wiley and Sons
Pages	151-163
Number of pages	13
ISBN (Print)	9780470647196
DOIs	https://doi.org/10.1002/9781118010549.ch16
State	Published - Nov 10 2011

Keywords

Primer selection, via sequence analysis
Sequence assignment, phylogenetic
Soil bacterial, phylogenetic analysis

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10.1002/9781118010549.ch16

Cite this

Morales, S. E., Cosart, T. F., Johnson, J. V., & Holben, W. E. (2011). Extensive Phylogenetic Analysis of a Soil Bacterial Community Illustrates Extreme Taxon Evenness and the Effects of Amplicon Length, Degree of Coverage, and DNA Fractionation on Classification and Ecological Parameters. In Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats (pp. 151-163). John Wiley and Sons. https://doi.org/10.1002/9781118010549.ch16

Morales, Sergio E. ; Cosart, Theodore F. ; Johnson, Jesse V. et al. / Extensive Phylogenetic Analysis of a Soil Bacterial Community Illustrates Extreme Taxon Evenness and the Effects of Amplicon Length, Degree of Coverage, and DNA Fractionation on Classification and Ecological Parameters. Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. John Wiley and Sons, 2011. pp. 151-163

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title = "Extensive Phylogenetic Analysis of a Soil Bacterial Community Illustrates Extreme Taxon Evenness and the Effects of Amplicon Length, Degree of Coverage, and DNA Fractionation on Classification and Ecological Parameters",

keywords = "Primer selection, via sequence analysis, Sequence assignment, phylogenetic, Soil bacterial, phylogenetic analysis",

author = "Morales, \{Sergio E.\} and Cosart, \{Theodore F.\} and Johnson, \{Jesse V.\} and Holben, \{William E.\}",

year = "2011",

month = nov,

day = "10",

doi = "10.1002/9781118010549.ch16",

language = "English",

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Morales, SE, Cosart, TF, Johnson, JV & Holben, WE 2011, Extensive Phylogenetic Analysis of a Soil Bacterial Community Illustrates Extreme Taxon Evenness and the Effects of Amplicon Length, Degree of Coverage, and DNA Fractionation on Classification and Ecological Parameters. in Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. John Wiley and Sons, pp. 151-163. https://doi.org/10.1002/9781118010549.ch16

Extensive Phylogenetic Analysis of a Soil Bacterial Community Illustrates Extreme Taxon Evenness and the Effects of Amplicon Length, Degree of Coverage, and DNA Fractionation on Classification and Ecological Parameters. / Morales, Sergio E.; Cosart, Theodore F.; Johnson, Jesse V. et al.
Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. John Wiley and Sons, 2011. p. 151-163.

Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

TY - CHAP

T1 - Extensive Phylogenetic Analysis of a Soil Bacterial Community Illustrates Extreme Taxon Evenness and the Effects of Amplicon Length, Degree of Coverage, and DNA Fractionation on Classification and Ecological Parameters

AU - Morales, Sergio E.

AU - Cosart, Theodore F.

AU - Johnson, Jesse V.

AU - Holben, William E.

PY - 2011/11/10

Y1 - 2011/11/10

KW - Primer selection, via sequence analysis

KW - Sequence assignment, phylogenetic

KW - Soil bacterial, phylogenetic analysis

UR - https://www.scopus.com/pages/publications/84886697732

U2 - 10.1002/9781118010549.ch16

DO - 10.1002/9781118010549.ch16

M3 - Chapter

AN - SCOPUS:84886697732

SN - 9780470647196

SP - 151

EP - 163

BT - Handbook of Molecular Microbial Ecology II

PB - John Wiley and Sons

ER -

Morales SE, Cosart TF, Johnson JV, Holben WE. Extensive Phylogenetic Analysis of a Soil Bacterial Community Illustrates Extreme Taxon Evenness and the Effects of Amplicon Length, Degree of Coverage, and DNA Fractionation on Classification and Ecological Parameters. In Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. John Wiley and Sons. 2011. p. 151-163 doi: 10.1002/9781118010549.ch16

Extensive Phylogenetic Analysis of a Soil Bacterial Community Illustrates Extreme Taxon Evenness and the Effects of Amplicon Length, Degree of Coverage, and DNA Fractionation on Classification and Ecological Parameters

Keywords

Access to Document

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