Supplemental programs for enhanced recovery of data from the DOTUR application

Sergio E. Morales; Theodore Cosart; Jesse V. Johnson; William E. Holben

doi:10.1016/j.mimet.2008.07.017

Supplemental programs for enhanced recovery of data from the DOTUR application

Sergio E. Morales, Theodore Cosart, Jesse V. Johnson, William E. Holben

Computer Science

University of Montana

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Abstract

In order to retrieve phylogenetic information from distance matrices generated from large-scale clone libraries, and to explore OTU distribution among them, we have developed downstream applications for use with the already available DOTUR program. These programs enhance and ease data extraction, providing phylogeny to the already generated distance data.

Original language	English
Pages (from-to)	572-575
Number of pages	4
Journal	Journal of Microbiological Methods
Volume	75
Issue number	3
DOIs	https://doi.org/10.1016/j.mimet.2008.07.017
State	Published - Dec 2008

Keywords

16S rRNA gene
ARB
DOTUR
Phylogenetic analysis

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10.1016/j.mimet.2008.07.017

Cite this

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title = "Supplemental programs for enhanced recovery of data from the DOTUR application",

abstract = "In order to retrieve phylogenetic information from distance matrices generated from large-scale clone libraries, and to explore OTU distribution among them, we have developed downstream applications for use with the already available DOTUR program. These programs enhance and ease data extraction, providing phylogeny to the already generated distance data.",

keywords = "16S rRNA gene, ARB, DOTUR, Phylogenetic analysis",

author = "Morales, {Sergio E.} and Theodore Cosart and Johnson, {Jesse V.} and Holben, {William E.}",

year = "2008",

month = dec,

doi = "10.1016/j.mimet.2008.07.017",

language = "English",

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AU - Morales, Sergio E.

AU - Cosart, Theodore

AU - Johnson, Jesse V.

AU - Holben, William E.

PY - 2008/12

Y1 - 2008/12

N2 - In order to retrieve phylogenetic information from distance matrices generated from large-scale clone libraries, and to explore OTU distribution among them, we have developed downstream applications for use with the already available DOTUR program. These programs enhance and ease data extraction, providing phylogeny to the already generated distance data.

AB - In order to retrieve phylogenetic information from distance matrices generated from large-scale clone libraries, and to explore OTU distribution among them, we have developed downstream applications for use with the already available DOTUR program. These programs enhance and ease data extraction, providing phylogeny to the already generated distance data.

KW - 16S rRNA gene

KW - ARB

KW - DOTUR

KW - Phylogenetic analysis

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U2 - 10.1016/j.mimet.2008.07.017

DO - 10.1016/j.mimet.2008.07.017

M3 - Article

C2 - 18703094

AN - SCOPUS:55249116257

SN - 0167-7012

VL - 75

SP - 572

EP - 575

JO - Journal of Microbiological Methods

JF - Journal of Microbiological Methods

IS - 3

ER -

Supplemental programs for enhanced recovery of data from the DOTUR application

Abstract

Keywords

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