TY - JOUR
T1 - US-SOMO HPLC-SAXS module
T2 - Dealing with capillary fouling and extraction of pure component patterns from poorly resolved SEC-SAXS data
AU - Brookes, Emre
AU - Vachette, Patrice
AU - Rocco, Mattia
AU - Pérez, Javier
N1 - Publisher Copyright:
© Emre Brookes et al. 2016.
PY - 2016/10/1
Y1 - 2016/10/1
N2 - Size-exclusion chromatography coupled with SAXS (small-Angle X-ray scattering), often performed using a flow-Through capillary, should allow direct collection of monodisperse sample data. However, capillary fouling issues and non-baseline-resolved peaks can hamper its efficacy. The UltraScan solution modeler (US-SOMO) HPLC-SAXS (high-performance liquid chromatography coupled with SAXS) module provides a comprehensive framework to analyze such data, starting with a simple linear baseline correction and symmetrical Gaussian decomposition tools [Brookes, Pérez, Cardinali, Profumo, Vachette & Rocco (2013). J. Appl. Cryst.46, 1823-1833]. In addition to several new features, substantial improvements to both routines have now been implemented, comprising the evaluation of outcomes by advanced statistical tools. The novel integral baseline-correction procedure is based on the more sound assumption that the effect of capillary fouling on scattering increases monotonically with the intensity scattered by the material within the X-ray beam. Overlapping peaks, often skewed because of sample interaction with the column matrix, can now be accurately decomposed using non-symmetrical modified Gaussian functions. As an example, the case of a polydisperse solution of aldolase is analyzed: from heavily convoluted peaks, individual SAXS profiles of tetramers, octamers and dodecamers are extracted and reliably modeled.The US-SOMO HPLC-SAXS (high-performance liquid chromatography coupled with small-Angle X-ray scattering) module is an advanced tool for the comprehensive analysis of SEC-SAXS (size-exclusion chromatography coupled with SAXS) data. It includes baseline and band-broadening correction routines, and Gaussian decomposition of overlapping skewed peaks into pure components.
AB - Size-exclusion chromatography coupled with SAXS (small-Angle X-ray scattering), often performed using a flow-Through capillary, should allow direct collection of monodisperse sample data. However, capillary fouling issues and non-baseline-resolved peaks can hamper its efficacy. The UltraScan solution modeler (US-SOMO) HPLC-SAXS (high-performance liquid chromatography coupled with SAXS) module provides a comprehensive framework to analyze such data, starting with a simple linear baseline correction and symmetrical Gaussian decomposition tools [Brookes, Pérez, Cardinali, Profumo, Vachette & Rocco (2013). J. Appl. Cryst.46, 1823-1833]. In addition to several new features, substantial improvements to both routines have now been implemented, comprising the evaluation of outcomes by advanced statistical tools. The novel integral baseline-correction procedure is based on the more sound assumption that the effect of capillary fouling on scattering increases monotonically with the intensity scattered by the material within the X-ray beam. Overlapping peaks, often skewed because of sample interaction with the column matrix, can now be accurately decomposed using non-symmetrical modified Gaussian functions. As an example, the case of a polydisperse solution of aldolase is analyzed: from heavily convoluted peaks, individual SAXS profiles of tetramers, octamers and dodecamers are extracted and reliably modeled.The US-SOMO HPLC-SAXS (high-performance liquid chromatography coupled with small-Angle X-ray scattering) module is an advanced tool for the comprehensive analysis of SEC-SAXS (size-exclusion chromatography coupled with SAXS) data. It includes baseline and band-broadening correction routines, and Gaussian decomposition of overlapping skewed peaks into pure components.
KW - CorMap analysis
KW - P-value analysis
KW - US-SOMO HPLC-SAXS module
KW - aldolase supramolecular complexes
KW - asymmetric modified Gaussian decomposition
KW - multi-resolution modeling
KW - poorly resolved chromatographic peaks
UR - http://www.scopus.com/inward/record.url?scp=84989948596&partnerID=8YFLogxK
U2 - 10.1107/S1600576716011201
DO - 10.1107/S1600576716011201
M3 - Article
AN - SCOPUS:84989948596
SN - 0021-8898
VL - 49
SP - 1827
EP - 1841
JO - Journal of Applied Crystallography
JF - Journal of Applied Crystallography
IS - 5
ER -