Abstract
Few microbial time-series studies have been conducted in open ocean habitats having low seasonal variability such as the North Pacific Subtropical Gyre (NPSG), where surface waters experience comparatively mild seasonal variation. To better describe microbial seasonal variability in this habitat, we analyzed rRNA amplicon and shotgun metagenomic data over two years at the Hawaii Ocean Time-series Station ALOHA. We postulated that this relatively stable habitat might reveal different environmental factors that influence planktonic microbial community diversity than those previously observed in more seasonally dynamic habitats. Unexpectedly, the data showed that microbial diversity at 25 m was positively correlated with average wind speed 3 to 10 days prior to sampling. In addition, microbial community composition at 25 m exhibited significant correlations with solar irradiance. Many bacterial groups whose relative abundances varied with solar radiation corresponded to taxa known to exhibit strong seasonality in other oceanic regions. Network co-correlation analysis of 25 m communities showed seasonal transitions in composition, and distinct successional cohorts of co-occurring phylogenetic groups. Similar network analyses of metagenomic data also indicated distinct seasonality in genes originating from cyanophage, and several bacterial clades including SAR116 and SAR324. At 500 m, microbial community diversity and composition did not vary significantly with any measured environmental parameters. The minimal seasonal variability in the NPSG facilitated detection of more subtle environmental influences, such as episodic wind variation, on surface water microbial diversity. Community composition in NPSG surface waters varied in response to solar irradiance, but less dramatically than reported in other ocean provinces.
| Original language | English |
|---|---|
| Pages (from-to) | 1308-1322 |
| Number of pages | 15 |
| Journal | ISME Journal |
| Volume | 10 |
| Issue number | 6 |
| DOIs | |
| State | Published - Jun 1 2016 |
Funding
We thank Dr Robert R. Bidigare, Yoshimi M. Rii and members of the DeLong Lab for valuable discussions, Craig Nosse for assistance with WHOTS Buoy data, Lance Fujieki for assistance with HOT environmental data, Rachel Barry and Tsultrim Palden for preparing samples for pyrosequencing and Ramunas Stepanauskas for providing single-cell genomes before publication. We are indebted to the HOT scientists and staff and to the captains and crews of the research vessel R/V Kilo Moana and R/V KOK and for logistical support. This work was supported by grants from the Gordon and Betty Moore Foundation #492.01 and 3777 (EFD), #3794 (DMK), and by the US Environmental Protection Agency STAR Fellowship (JAB). In addition, We acknowledge NSF for support of the HOT program (including the most recent OCE1260164 to MJC and DMK) the Center for Microbial Oceanography: Research and Education (C-MORE; EF0424599 to DMK and EFD) and the Simons Collaboration on Ocean Processes and Ecology (SCOPE; #329108 to DMK, EFD). Data from the WHOTS surface mooring are gratefully acknowledged; the NOAA Climate Observation Division provides funding to Robert A Weller and Albert J Plueddemann at WHOI to support the long-term deployment of the surface mooring. This work is a contribution of the Center for Microbial Oceanography: Research and Education, and the Simons Collaboration on Ocean Processes and Ecology.
| Funders | Funder number |
|---|---|
| Daniel K. Inouye Center for Microbial Oceanography: Research and Education | EF0424599, 329108 |
| OCE1260164 | |
| 1260164 | |
| National Oceanic and Atmospheric Administration | |
| 492.01, 3794, 3777 | |
| Woods Hole Oceanographic Institution |
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